Browse of TCMCG016C18679 protein

CDS

Accession Number	TCMCG016C18679
gbkey	CDS
Protein Id	OMO68852.1
Location	complement(join(19075..19269,19350..19480,19750..19981,20068..20319,20959..21045,21125..21181,21292..21351,21568..21860,22023..22179,22260..22553,22805..22935,23012..23540,24132..24690,25964..26081,26169..26247,26454..26655,27177..27212,27680..27771,28752..28796))
Organism	Corchorus capsularis
locus_tag	CCACVL1_19801

Protein

Length	1182aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01012146.1
Definition	hypothetical protein CCACVL1_19801 [Corchorus capsularis]
Locus_tag	CCACVL1_19801

EGGNOG-MAPPER Annotation

COG_category	L
Description	Chloroplastic group IIA intron splicing facilitator CRS1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000372        [VIEW IN EMBL-EBI] GO:0000373        [VIEW IN EMBL-EBI] GO:0000375        [VIEW IN EMBL-EBI] GO:0000376        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAAAATGAAAAAGAAATTGGCCTAATAGAAAGGATGATCCATGGAAGGTTGCTGGCATCATCAAAACCCGACAGGGATGATGCTGCTGCGTATGCTCGTTGGTTGGTGTCCCAGAATACTTGGGGAATTCTAAATACAATATCAAGTGAGTTGGATGGAGCGCCTTTTGGGAATGTTGTTTCATTTAGTGATGGGACACCTGATAAAAGTACTGGCATCCCGTATTTCTATTTGACAACCCTTGATCCAACAGCAAGAAACGCATTAAAAGACCAAAGGTCCTCACTCGCAATCAGCGAGTTTCCACTTGGAACTTGTGGCAATGCAGACCCAGAGAGCCCTGTTTGTGCAAAAATAACACTCACAGGAAAGTTGGTACTACTTGATGCAAACTCTAAAGAGGCGGAATTTGCTCAAACTGCTCTATTCACAAAGCATCCAGAAATGAAGGGGTGGCCTAAGAGTCATAACTTTCAGATCTACAAATTGGAGATCGAGGACATATTTATGATCAACTGGTATGGTGGCCCTAAACCTCTAACAGTTGACCAGTACCTCAAATATAAAATCTCCGTAACCCCACCCGGAAACAAGACCCTTCCTCAATCCGCCATTCAACGCATTGCTGACAAGCTTCGGTCTCTTGGATTCTCTGAAACCCAAAACGCCGAACCCAAATCCAAACCTGGGTCTGGGCCCGGCTCTGATTCTCCCGGAGAAATTTTTGTGCCTTTACCGCATAAATTACCCAAGTACCGGGTTGGGCATACAATCGATACCAGCTGGAGCACGCCGGAGAATCCGGTGCCAGACCCGGGTTCGGGTCCGGGCAACTTGATGGTGAGGTTTAAGGAAATGAAGAGGGAGAGGAAGAGATTGGGGAGGAGGGTGACGGAGGAGGACAGGGCGGTTCCAAGTCTGGCGGAGCTGACGCTGTCGAAGGCAGAGCTGAGGAGGTTGCAAACGTTGGGGATTGCTGAGGAAAGGAAGTTGAAGGTTGGGAAAGCGGGCATTACGGAAGGAATTGTGAATGGGATTCATGAAAGGTGGAGAAGAAATGAGGTGGTTAGGATTGTTTGTGAAGATATTTGTAAAATGAATATGAAGAGGACTCATGAGGTTTTGGAGAGGAAGACCGGAGGGTTGGTGGTTTGGAGATCTGGAAGTAAAATAATATTGTATAGAGGGGCCAATTACAAGTATCCTTATTTCTCGGCTGATAAAATCGCAACAGATGACACTTCTTCCAGTGCTTCACCAGTTACAGATATGGATAATGAGGAACTCCATGAAACAGAAAGCTGCTCATCTGAATCCACTGCTGCAAAATCTGCTACACCAAATGCAACTGACAAAACGACTAAACCAATGATAGTTCAAGGTGTTGGATCTCCAAATAGAGTACGATTTCAAATGCCAGGTGAGGCAGAACTTGTTGAAGAAGCTGACCGCTTGTTAGATGGACTGGGTCCAAGATTTAATGACTGGTGGGGTTATGAGCCTCTTCCGGTCGACGGTGATCTTCTACCTGCAGTTATTCCAGGATACAGGAGACCCTTCCGCCTTCTTCCTTATGGTGTGAAGCCAATCCTGACAAATGATGAAATGACCACTTTAAGAAGACTTGCTCGACCCTTACCCTGTCATTTTGTGTTAGGAAGAAATAGAAAACATCAGGGATTGGCTGCATCAATTGTCAAGCTCTGGGAAAAGTGTGAGATTGCCAAAATTGCCGTTAAGAGAGGAGTACAGAACACTAATAGTTTATTGATGGCACAAGAATTAAAGTGGCTAACTGGAGGAACTTTGCTCGCACGAGATAAGGATTTCATTGTCTTATATAGGGGGAAAGATTTCCTGCCTTCTGCTGTTTCTTCTGCAATAGAAGAGCGGAGAAAGCATGGCACTGCTGGATGTAGTGAATCAAGGGAAGCTGCACAGGAGGTCAATGAGAATGCTACAAGTGGCTACAAAAACGAAAGTAAGGGTTCCAAGGATGAGAGGAGTAATACCTTTGGTGGCCCAAAAAACAGGAAGTCTGCTGAAGCAACTATTATAAAGACACACACGAAGTTATCTATGGCCTTAGAGAAGAAAGAAAAGGCAGAGAAACTTCTGGCAGAGCTGGAGCAGGCAGAGATCCCCCAACAATCTGATATTGATAAAGAGGGCATAACTGAAGAAGAAAGATATATGCTTAGGAAGGTTGGCTTGAGAATGAAGCCTTTCCTCCTATTAGGTAGACGGGGAGTATTTGATGGAACGGTTGAAAATATGCATCTTCACTGGAAGTATAGGGAACTTGTGAAGATCATTTCTAAGGATATAAATTTTGAAGCTGTTTATCAAGTAGCACGGATGTTAGAGGCAGAAAGTGGTGGAATATTAGTGACTGTCGAGAGAGTAAGTAAGGGTTATGCAATCATAGTTTATCGTGGGAAGAACTATGAGCGGCCTACTAGTCTGAGACCTAAGACACTTCTTACTAAGAGACAGGCAATGAAGCGCTCTCTAGAGGAACAGCGCCGTAAGTCCTTGAAACTGCATATTTTGAAGCTTACAAGAAACATCGATGAATTGAAACAACAGCTGTTTGTAGACAAGGGGACAAACAACATGCAAACTGTTGAACAGTCAAGATTGCCAATGGACCAAGAAGAGCTGGAAATTTTGCAGTCAGTCAAGGACGCAACATCCGATATTCAATGCCCCGCATCTCCAACAGGGCATGTAGAGGCTACTGACAAAGGTAAATCCAAGTCGGTTTCCATAGAAAATGATAAGTCAGTTGCTGCAATAAGTATTTGCCAACCCTCTGAACTAGAGCCTACAGAGCCATATTCTATACATGATGCTATTGAGAATCATAAAACAGAATCTGAAGCTTCATCCGAATCTGTGACCATAAAAAGAGATGCACCTGAACTGAGGATGCTGCATACTGAAGTGGAAATAGTTGACTCCACATCTTTTCCTGATAACGTTGGGGAAGAAATAGACTATTCTGGTGCTGTTAATGCTGAGGACTGTATTTCCAATAATGGGTCAATGGAATCATTGATTGAATCAGCCAACGATAAGTTGCATGTTTCAAATTCATCAACGGATGAAAATATGTCGGATAAGATGGCTTCAACAGCAAAGTTTCTTTCTAACAAAGACAGACTTCTCTTACGAAAGCAGGCTCTCAAAATGAAGAAACGCCCTCTGCTCGCATTTGGGAGGAGCAACATTGTGACTGGTCTCGCAAAAGCAATCAAGGCACACTTTCAGAAGCATCCTCTTGTTATAGTTAATGTGAAAGGGAGGGCTAAAGGGACTTCCGTGCAGGAGGTGGTGCTAAAGCTGCAGGAAGCCACAGGTGCAATTCTAGTTTCTCAGGAACCTAGTAAAGTCATACTGTATCGAGGTTGGGGTGCAGGAGATGAAGTAGGCCGTGGTCATAAAAAGAATACAAAAGATGCATCAATTCAGAATCGGCCTGCAGTTTCCCCTGAGCTTATTGCAGCAATCAAACTTGAATGTGGCTTGCTACAAAACCAATAG

Protein:   MQNEKEIGLIERMIHGRLLASSKPDRDDAAAYARWLVSQNTWGILNTISSELDGAPFGNVVSFSDGTPDKSTGIPYFYLTTLDPTARNALKDQRSSLAISEFPLGTCGNADPESPVCAKITLTGKLVLLDANSKEAEFAQTALFTKHPEMKGWPKSHNFQIYKLEIEDIFMINWYGGPKPLTVDQYLKYKISVTPPGNKTLPQSAIQRIADKLRSLGFSETQNAEPKSKPGSGPGSDSPGEIFVPLPHKLPKYRVGHTIDTSWSTPENPVPDPGSGPGNLMVRFKEMKRERKRLGRRVTEEDRAVPSLAELTLSKAELRRLQTLGIAEERKLKVGKAGITEGIVNGIHERWRRNEVVRIVCEDICKMNMKRTHEVLERKTGGLVVWRSGSKIILYRGANYKYPYFSADKIATDDTSSSASPVTDMDNEELHETESCSSESTAAKSATPNATDKTTKPMIVQGVGSPNRVRFQMPGEAELVEEADRLLDGLGPRFNDWWGYEPLPVDGDLLPAVIPGYRRPFRLLPYGVKPILTNDEMTTLRRLARPLPCHFVLGRNRKHQGLAASIVKLWEKCEIAKIAVKRGVQNTNSLLMAQELKWLTGGTLLARDKDFIVLYRGKDFLPSAVSSAIEERRKHGTAGCSESREAAQEVNENATSGYKNESKGSKDERSNTFGGPKNRKSAEATIIKTHTKLSMALEKKEKAEKLLAELEQAEIPQQSDIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKDINFEAVYQVARMLEAESGGILVTVERVSKGYAIIVYRGKNYERPTSLRPKTLLTKRQAMKRSLEEQRRKSLKLHILKLTRNIDELKQQLFVDKGTNNMQTVEQSRLPMDQEELEILQSVKDATSDIQCPASPTGHVEATDKGKSKSVSIENDKSVAAISICQPSELEPTEPYSIHDAIENHKTESEASSESVTIKRDAPELRMLHTEVEIVDSTSFPDNVGEEIDYSGAVNAEDCISNNGSMESLIESANDKLHVSNSSTDENMSDKMASTAKFLSNKDRLLLRKQALKMKKRPLLAFGRSNIVTGLAKAIKAHFQKHPLVIVNVKGRAKGTSVQEVVLKLQEATGAILVSQEPSKVILYRGWGAGDEVGRGHKKNTKDASIQNRPAVSPELIAAIKLECGLLQNQ